IL_6ZMO_033

3D structure

PDB id

6ZMO (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGGG*CG

Length

7 nucleotides

Bulged bases

6ZMO|1|L5|G|729, 6ZMO|1|L5|G|730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZMO|1|L5|C|727
6ZMO|1|L5|U|728
6ZMO|1|L5|G|729
6ZMO|1|L5|G|730
6ZMO|1|L5|G|731
*
6ZMO|1|L5|C|938
6ZMO|1|L5|G|939

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LF

60S ribosomal protein L7

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a