IL_6ZMO_282

3D structure

PDB id

6ZMO (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUGGC*GAAUCC

Length

12 nucleotides

Bulged bases

6ZMO|1|L5|G|1975

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZMO|1|L5|G|1972
6ZMO|1|L5|G|1973
6ZMO|1|L5|U|1974
6ZMO|1|L5|G|1975
6ZMO|1|L5|G|1976
6ZMO|1|L5|C|1977
*
6ZMO|1|L5|G|1989
6ZMO|1|L5|A|1990
6ZMO|1|L5|A|1991
6ZMO|1|L5|U|1992
6ZMO|1|L5|C|1993
6ZMO|1|L5|C|1994

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LI

60S ribosomal protein L10-like

Chain Ls

60S acidic ribosomal protein P0

Chain Lt

60S ribosomal protein L12