IL_6ZMW_014

3D structure

PDB id

6ZMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human 48S translational initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGGAUAAC*GCUAAUA(OMC)A

Length

17 nucleotides

Bulged bases

6ZMW|1|A|U|172

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZMW|1|A|U|144
6ZMW|1|A|G|145
6ZMW|1|A|G|146
6ZMW|1|A|A|147
6ZMW|1|A|U|148
6ZMW|1|A|A|149
6ZMW|1|A|A|150
6ZMW|1|A|C|151
*
6ZMW|1|A|G|167
6ZMW|1|A|C|168
6ZMW|1|A|U|169
6ZMW|1|A|A|170
6ZMW|1|A|A|171
6ZMW|1|A|U|172
6ZMW|1|A|A|173
6ZMW|1|A|OMC|174
6ZMW|1|A|A|175

Current chains

Chain A

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S6

Chain T

40S ribosomal protein S24