IL_6ZQC_058

3D structure

PDB id

6ZQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Pre-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGCCGGUC*GGAUUUCC

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZQC|1|D3|G|651
6ZQC|1|D3|G|652
6ZQC|1|D3|C|653
6ZQC|1|D3|C|654
6ZQC|1|D3|G|655
6ZQC|1|D3|G|656
6ZQC|1|D3|U|657
6ZQC|1|D3|C|658
*
6ZQC|1|D3|G|676
6ZQC|1|D3|G|677
6ZQC|1|D3|A|678
6ZQC|1|D3|U|679
6ZQC|1|D3|U|680
6ZQC|1|D3|U|681
6ZQC|1|D3|C|682
6ZQC|1|D3|C|683

Current chains

Chain D3

18S rRNA

Nearby chains

Chain UT

U3 small nucleolar RNA-associated protein 20