IL_6ZQC_062

3D structure

PDB id

6ZQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Pre-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUUUGG*CCAUC

Length

11 nucleotides

Bulged bases

6ZQC|1|D3|U|820

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZQC|1|D3|G|819
6ZQC|1|D3|U|820
6ZQC|1|D3|U|821
6ZQC|1|D3|U|822
6ZQC|1|D3|G|823
6ZQC|1|D3|G|824
*
6ZQC|1|D3|C|848
6ZQC|1|D3|C|849
6ZQC|1|D3|A|850
6ZQC|1|D3|U|851
6ZQC|1|D3|C|852

Current chains

Chain D3

18S rRNA

Nearby chains

Chain DN

40S ribosomal protein S13