IL_6ZQC_094
3D structure
- PDB id
- 6ZQC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Pre-A1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGUUGAUG*CUGAC
- Length
- 13 nucleotides
- Bulged bases
- 6ZQC|1|D4|U|81
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZQC|1|D4|G|78
6ZQC|1|D4|G|79
6ZQC|1|D4|U|80
6ZQC|1|D4|U|81
6ZQC|1|D4|G|82
6ZQC|1|D4|A|83
6ZQC|1|D4|U|84
6ZQC|1|D4|G|85
*
6ZQC|1|D4|C|325
6ZQC|1|D4|U|326
6ZQC|1|D4|G|327
6ZQC|1|D4|A|328
6ZQC|1|D4|C|329
Current chains
- Chain D4
- U3 snoRNA
Nearby chains
- Chain CE
- Nucleolar protein 58
- Chain CF
- 13 kDa ribonucleoprotein-associated protein
- Chain D2
- 5ETS RNA
- Chain UK
- U3 small nucleolar RNA-associated protein 11
- Chain UQ
- NET1-associated nuclear protein 1
- Chain UR
- U3 small nucleolar RNA-associated protein 18
Coloring options: