IL_6ZQD_071

3D structure

PDB id

6ZQD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Post-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUAGAGA*UCUCAGA

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZQD|1|D3|U|1687
6ZQD|1|D3|U|1688
6ZQD|1|D3|A|1689
6ZQD|1|D3|G|1690
6ZQD|1|D3|A|1691
6ZQD|1|D3|G|1692
6ZQD|1|D3|A|1693
*
6ZQD|1|D3|U|1708
6ZQD|1|D3|C|1709
6ZQD|1|D3|U|1710
6ZQD|1|D3|C|1711
6ZQD|1|D3|A|1712
6ZQD|1|D3|G|1713
6ZQD|1|D3|A|1714

Current chains

Chain D3

18S rRNA

Nearby chains