IL_6ZQG_036

3D structure

PDB id

6ZQG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGCCGGUC*GGAUUUCC

Length

16 nucleotides

Bulged bases

6ZQG|1|D3|G|656

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZQG|1|D3|G|651
6ZQG|1|D3|G|652
6ZQG|1|D3|C|653
6ZQG|1|D3|C|654
6ZQG|1|D3|G|655
6ZQG|1|D3|G|656
6ZQG|1|D3|U|657
6ZQG|1|D3|C|658
*
6ZQG|1|D3|G|676
6ZQG|1|D3|G|677
6ZQG|1|D3|A|678
6ZQG|1|D3|U|679
6ZQG|1|D3|U|680
6ZQG|1|D3|U|681
6ZQG|1|D3|C|682
6ZQG|1|D3|C|683

Current chains

Chain D3

18S rRNA

Nearby chains

Chain DJ

40S ribosomal protein S9-A