IL_6ZS9_043
3D structure
- PDB id
- 6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with ribosome recycling factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CAAGU*AUAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZS9_043 not in the Motif Atlas
- Geometric match to IL_1GID_010
- Geometric discrepancy: 0.388
- The information below is about IL_1GID_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77691.4
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
6ZS9|1|AA|C|1500
6ZS9|1|AA|A|1501
6ZS9|1|AA|A|1502
6ZS9|1|AA|G|1503
6ZS9|1|AA|U|1504
*
6ZS9|1|AA|A|1546
6ZS9|1|AA|U|1547
6ZS9|1|AA|A|1548
6ZS9|1|AA|G|1549
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain A3
- Aurora kinase A-interacting protein
- Chain A5
- Ribosome-recycling factor, mitochondrial
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain XA
- Large subunit ribosomal RNA; LSU rRNA
- Chain XL
- 39S ribosomal protein L14, mitochondrial
Coloring options: