IL_6ZS9_044

3D structure

PDB id

6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with ribosome recycling factor

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

ACUU*AUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZS9_044 not in the Motif Atlas

Geometric match to IL_4EYA_003

Geometric discrepancy: 0.1797

The information below is about IL_4EYA_003

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

6ZS9|1|AA|A|1507
6ZS9|1|AA|C|1508
6ZS9|1|AA|U|1509
6ZS9|1|AA|U|1510
*
6ZS9|1|AA|A|1540
6ZS9|1|AA|U|1541
6ZS9|1|AA|U|1542
6ZS9|1|AA|U|1543

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain A3

Aurora kinase A-interacting protein

Chain XL

39S ribosomal protein L14, mitochondrial