IL_6ZS9_054

3D structure

PDB id

6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with ribosome recycling factor

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CCG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZS9_054 not in the Motif Atlas

Homologous match to IL_4WF9_020

Geometric discrepancy: 0.1143

The information below is about IL_4WF9_020

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

6ZS9|1|XA|C|1904
6ZS9|1|XA|C|1905
6ZS9|1|XA|G|1906
*
6ZS9|1|XA|C|2016
6ZS9|1|XA|U|2017
6ZS9|1|XA|G|2018

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XF

39S ribosomal protein L4, mitochondrial

Chain XM

39S ribosomal protein L15, mitochondrial

Chain i

39S ribosomal protein L51, mitochondrial