IL_6ZS9_088
3D structure
- PDB id
- 6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with ribosome recycling factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GCAA*UAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZS9_088 not in the Motif Atlas
- Geometric match to IL_7RQB_093
- Geometric discrepancy: 0.1913
- The information below is about IL_7RQB_093
- Detailed Annotation
- Major groove platform with extra pair
- Broad Annotation
- Major groove platform
- Motif group
- IL_63450.2
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 8
Unit IDs
6ZS9|1|XA|G|2943
6ZS9|1|XA|C|2944
6ZS9|1|XA|A|2945
6ZS9|1|XA|A|2946
*
6ZS9|1|XA|U|2980
6ZS9|1|XA|A|2981
6ZS9|1|XA|C|2982
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain A5
- Ribosome-recycling factor, mitochondrial
- Chain XI
- 39S ribosomal protein L10, mitochondrial
- Chain XN
- 39S ribosomal protein L16, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: