IL_6ZSA_111
3D structure
- PDB id
- 6ZSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- AUAUC*GCCCU
- Length
- 10 nucleotides
- Bulged bases
- 6ZSA|1|AA|U|1187, 6ZSA|1|AA|A|1188, 6ZSA|1|AA|U|1189
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZSA_111 not in the Motif Atlas
- Geometric match to IL_1KOG_007
- Geometric discrepancy: 0.2609
- The information below is about IL_1KOG_007
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.14
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
6ZSA|1|AA|A|1186
6ZSA|1|AA|U|1187
6ZSA|1|AA|A|1188
6ZSA|1|AA|U|1189
6ZSA|1|AA|C|1190
*
6ZSA|1|AA|G|1464
6ZSA|1|AA|C|1465
6ZSA|1|AA|C|1466
6ZSA|1|AA|C|1467
6ZSA|1|AA|U|1468
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain A2
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
- Chain AF
- 28S ribosomal protein S7, mitochondrial
- Chain AG
- 28S ribosomal protein S9, mitochondrial
Coloring options: