IL_6ZSB_044

3D structure

PDB id

6ZSB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

ACUU*AUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZSB_044 not in the Motif Atlas

Geometric match to IL_5EW4_001

Geometric discrepancy: 0.2043

The information below is about IL_5EW4_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_76776.1

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

4

Unit IDs

6ZSB|1|AA|A|1507
6ZSB|1|AA|C|1508
6ZSB|1|AA|U|1509
6ZSB|1|AA|U|1510
*
6ZSB|1|AA|A|1540
6ZSB|1|AA|U|1541
6ZSB|1|AA|U|1542
6ZSB|1|AA|U|1543

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain A3

Aurora kinase A-interacting protein

Chain XL

39S ribosomal protein L14, mitochondrial