IL_6ZSC_021

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUA*UG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZSC_021 not in the Motif Atlas

Geometric match to IL_3WBM_004

Geometric discrepancy: 0.3063

The information below is about IL_3WBM_004

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_18188.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6ZSC|1|AA|C|1020
6ZSC|1|AA|U|1021
6ZSC|1|AA|A|1022
*
6ZSC|1|AA|U|1029
6ZSC|1|AA|G|1030

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain AE

28S ribosomal protein S6, mitochondrial

Chain AP

28S ribosomal protein S18c, mitochondrial

Chain AQ

28S ribosomal protein S21, mitochondrial