IL_6ZSC_023

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAACU*ACUAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZSC_023 not in the Motif Atlas

Homologous match to IL_5J7L_037

Geometric discrepancy: 0.1968

The information below is about IL_5J7L_037

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

6ZSC|1|AA|A|1067
6ZSC|1|AA|A|1068
6ZSC|1|AA|A|1069
6ZSC|1|AA|C|1070
6ZSC|1|AA|U|1071
*
6ZSC|1|AA|A|1087
6ZSC|1|AA|C|1088
6ZSC|1|AA|U|1089
6ZSC|1|AA|A|1090
6ZSC|1|AA|U|1091

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AI

28S ribosomal protein S11, mitochondrial

Chain AQ

28S ribosomal protein S21, mitochondrial

Chain XA

Large subunit ribosomal RNA; LSU rRNA