IL_6ZSD_014
3D structure
- PDB id
- 6ZSD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGGUCAAUUU*AUUA
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZSD_014 not in the Motif Atlas
- Geometric match to IL_5EW4_001
- Geometric discrepancy: 0.1959
- The information below is about IL_5EW4_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_76776.3
- Basepair signature
- cWW-L-R-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6ZSD|1|AA|U|876
6ZSD|1|AA|G|877
6ZSD|1|AA|G|878
6ZSD|1|AA|U|879
6ZSD|1|AA|C|880
6ZSD|1|AA|A|881
6ZSD|1|AA|A|882
6ZSD|1|AA|U|883
6ZSD|1|AA|U|884
6ZSD|1|AA|U|885
*
6ZSD|1|AA|A|910
6ZSD|1|AA|U|911
6ZSD|1|AA|U|912
6ZSD|1|AA|A|913
Current chains
- Chain AA
- 12SrRNA
Nearby chains
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AO
- 28S ribosomal protein S18b, mitochondrial
- Chain AZ
- 28S ribosomal protein S33, mitochondrial
Coloring options: