3D structure

PDB id
6ZSD (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CUAAACC*GAUGAAAAAUUAUAACCAAG
Length
27 nucleotides
Bulged bases
6ZSD|1|XA|A|1804
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZSD|1|XA|C|1672
6ZSD|1|XA|U|1673
6ZSD|1|XA|A|1674
6ZSD|1|XA|A|1675
6ZSD|1|XA|A|1676
6ZSD|1|XA|C|1677
6ZSD|1|XA|C|1678
*
6ZSD|1|XA|G|1797
6ZSD|1|XA|A|1798
6ZSD|1|XA|U|1799
6ZSD|1|XA|G|1800
6ZSD|1|XA|A|1801
6ZSD|1|XA|A|1802
6ZSD|1|XA|A|1803
6ZSD|1|XA|A|1804
6ZSD|1|XA|A|1805
6ZSD|1|XA|U|1806
6ZSD|1|XA|U|1807
6ZSD|1|XA|A|1808
6ZSD|1|XA|U|1809
6ZSD|1|XA|A|1810
6ZSD|1|XA|A|1811
6ZSD|1|XA|C|1812
6ZSD|1|XA|C|1813
6ZSD|1|XA|A|1814
6ZSD|1|XA|A|1815
6ZSD|1|XA|G|1816

Current chains

Chain XA
16S rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain XR
39S ribosomal protein L20, mitochondrial
Chain XT
39S ribosomal protein L22, mitochondrial
Chain XV
39S ribosomal protein L24, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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