IL_6ZSD_077

3D structure

PDB id

6ZSD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAUAAUCACUUG*CCUG

Length

16 nucleotides

Bulged bases

6ZSD|1|XA|A|2601, 6ZSD|1|XA|U|2607, 6ZSD|1|XA|U|2626

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZSD|1|XA|C|2597
6ZSD|1|XA|A|2598
6ZSD|1|XA|U|2599
6ZSD|1|XA|A|2600
6ZSD|1|XA|A|2601
6ZSD|1|XA|U|2602
6ZSD|1|XA|C|2603
6ZSD|1|XA|A|2604
6ZSD|1|XA|C|2605
6ZSD|1|XA|U|2606
6ZSD|1|XA|U|2607
6ZSD|1|XA|G|2608
*
6ZSD|1|XA|C|2624
6ZSD|1|XA|C|2625
6ZSD|1|XA|U|2626
6ZSD|1|XA|G|2627

Current chains

Chain XA

16S rRNA

Nearby chains

Chain A3

Aurora kinase A-interacting protein

Chain AA

Small subunit ribosomal RNA; SSU rRNA