IL_6ZSD_108

3D structure

PDB id

6ZSD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCCCA*UACCCUCAC

Length

14 nucleotides

Bulged bases

6ZSD|1|XA|C|2414, 6ZSD|1|XA|C|2417

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZSD|1|XA|G|2377
6ZSD|1|XA|C|2378
6ZSD|1|XA|C|2379
6ZSD|1|XA|C|2380
6ZSD|1|XA|A|2381
*
6ZSD|1|XA|U|2411
6ZSD|1|XA|A|2412
6ZSD|1|XA|C|2413
6ZSD|1|XA|C|2414
6ZSD|1|XA|C|2415
6ZSD|1|XA|U|2416
6ZSD|1|XA|C|2417
6ZSD|1|XA|A|2418
6ZSD|1|XA|C|2419

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain 9

39S ribosomal protein L41, mitochondrial

Chain XU

39S ribosomal protein L23, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial