IL_6ZSD_109

3D structure

PDB id

6ZSD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AUCUACAAUCAACCAAC*GUCAUU

Length

23 nucleotides

Bulged bases

6ZSD|1|XA|C|2393, 6ZSD|1|XA|U|2404, 6ZSD|1|XA|C|2405, 6ZSD|1|XA|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZSD|1|XA|A|2384
6ZSD|1|XA|U|2385
6ZSD|1|XA|C|2386
6ZSD|1|XA|U|2387
6ZSD|1|XA|A|2388
6ZSD|1|XA|C|2389
6ZSD|1|XA|A|2390
6ZSD|1|XA|A|2391
6ZSD|1|XA|U|2392
6ZSD|1|XA|C|2393
6ZSD|1|XA|A|2394
6ZSD|1|XA|A|2395
6ZSD|1|XA|C|2396
6ZSD|1|XA|C|2397
6ZSD|1|XA|A|2398
6ZSD|1|XA|A|2399
6ZSD|1|XA|C|2400
*
6ZSD|1|XA|G|2403
6ZSD|1|XA|U|2404
6ZSD|1|XA|C|2405
6ZSD|1|XA|A|2406
6ZSD|1|XA|U|2407
6ZSD|1|XA|U|2408

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain XD

39S ribosomal protein L2, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial