IL_6ZSE_093

3D structure

PDB id

6ZSE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

6ZSE|1|XA|A|3059, 6ZSE|1|XA|C|3060

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZSE_093 not in the Motif Atlas

Geometric match to IL_7RQB_098

Geometric discrepancy: 0.2117

The information below is about IL_7RQB_098

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71530.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

6ZSE|1|XA|C|2999
6ZSE|1|XA|A|3000
*
6ZSE|1|XA|U|3058
6ZSE|1|XA|A|3059
6ZSE|1|XA|C|3060
6ZSE|1|XA|G|3061

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XE

39S ribosomal protein L3, mitochondrial

Chain XK

39S ribosomal protein L13, mitochondrial