IL_6ZTJ_026
3D structure
- PDB id
- 6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 6ZTJ|1|AA|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZTJ_026 not in the Motif Atlas
- Homologous match to IL_5J7L_026
- Geometric discrepancy: 0.1083
- The information below is about IL_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
6ZTJ|1|AA|C|569
6ZTJ|1|AA|G|570
6ZTJ|1|AA|U|571
6ZTJ|1|AA|A|572
6ZTJ|1|AA|A|573
6ZTJ|1|AA|A|574
6ZTJ|1|AA|G|575
*
6ZTJ|1|AA|C|880
6ZTJ|1|AA|G|881
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AH
- 30S ribosomal protein S8
- Chain AL
- 30S ribosomal protein S12
- Chain AQ
- 30S ribosomal protein S17
Coloring options: