IL_6ZTJ_060
3D structure
- PDB id
- 6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GU(5MC)AC*GAAGUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZTJ_060 not in the Motif Atlas
- Homologous match to IL_4LFB_058
- Geometric discrepancy: 0.2888
- The information below is about IL_4LFB_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZTJ|1|AA|G|1405
6ZTJ|1|AA|U|1406
6ZTJ|1|AA|5MC|1407
6ZTJ|1|AA|A|1408
6ZTJ|1|AA|C|1409
*
6ZTJ|1|AA|G|1491
6ZTJ|1|AA|A|1492
6ZTJ|1|AA|A|1493
6ZTJ|1|AA|G|1494
6ZTJ|1|AA|U|1495
6ZTJ|1|AA|C|1496
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AL
- 30S ribosomal protein S12
- Chain AV
- mRNA
- Chain AX
- Transfer RNA; tRNA
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: