IL_6ZTJ_171

3D structure

PDB id

6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UU*ACUG

Length

6 nucleotides

Bulged bases

6ZTJ|1|BA|C|2712, 6ZTJ|1|BA|U|2713

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTJ_171 not in the Motif Atlas

Homologous match to IL_5J7L_349

Geometric discrepancy: 0.0735

The information below is about IL_5J7L_349

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

6ZTJ|1|BA|U|2695
6ZTJ|1|BA|U|2696
*
6ZTJ|1|BA|A|2711
6ZTJ|1|BA|C|2712
6ZTJ|1|BA|U|2713
6ZTJ|1|BA|G|2714

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BO

50S ribosomal protein L17

Chain BQ

50S ribosomal protein L19