IL_6ZTJ_193

3D structure

PDB id

6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GU(G7M)*CC

Length

5 nucleotides

Bulged bases

6ZTJ|1|BA|U|2068

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTJ_193 not in the Motif Atlas

Homologous match to IL_9DFE_080

Geometric discrepancy: 0.1173

The information below is about IL_9DFE_080

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

6ZTJ|1|BA|G|2067
6ZTJ|1|BA|U|2068
6ZTJ|1|BA|G7M|2069
*
6ZTJ|1|BA|C|2442
6ZTJ|1|BA|C|2443

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BM

50S ribosomal protein L15