IL_6ZTL_094

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCAAG*CAACC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTL_094 not in the Motif Atlas

Homologous match to IL_5J7L_274

Geometric discrepancy: 0.237

The information below is about IL_5J7L_274

Detailed Annotation

Double sheared with non-canonical cWW

Broad Annotation

Double sheared

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

6ZTL|1|BA|G|875
6ZTL|1|BA|C|876
6ZTL|1|BA|A|877
6ZTL|1|BA|A|878
6ZTL|1|BA|G|879
*
6ZTL|1|BA|C|898
6ZTL|1|BA|A|899
6ZTL|1|BA|A|900
6ZTL|1|BA|C|901
6ZTL|1|BA|C|902

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AX

Transfer RNA; tRNA

Chain BN

50S ribosomal protein L16