IL_6ZTL_107

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGU*AGUG

Length

7 nucleotides

Bulged bases

6ZTL|1|BA|G|1248

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTL_107 not in the Motif Atlas

Homologous match to IL_4WF9_044

Geometric discrepancy: 0.1157

The information below is about IL_4WF9_044

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_42997.3

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

20

Unit IDs

6ZTL|1|BA|C|1196
6ZTL|1|BA|G|1197
6ZTL|1|BA|U|1198
*
6ZTL|1|BA|A|1247
6ZTL|1|BA|G|1248
6ZTL|1|BA|U|1249
6ZTL|1|BA|G|1250

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BM

50S ribosomal protein L15

Chain BR

50S ribosomal protein L20