IL_6ZTL_116

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

6ZTL|1|BA|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTL_116 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.1112

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

6ZTL|1|BA|C|1417
6ZTL|1|BA|G|1418
6ZTL|1|BA|A|1419
6ZTL|1|BA|A|1420
6ZTL|1|BA|G|1421
*
6ZTL|1|BA|C|1577
6ZTL|1|BA|U|1578
6ZTL|1|BA|A|1579
6ZTL|1|BA|A|1580
6ZTL|1|BA|G|1581

Current chains

Chain BA

23S ribosomal RNA

Nearby chains