IL_6ZTL_166

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

6ZTL|1|BA|A|2602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTL_166 not in the Motif Atlas

Geometric match to IL_4R4V_004

Geometric discrepancy: 0.3419

The information below is about IL_4R4V_004

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

6ZTL|1|BA|C|2591
6ZTL|1|BA|G|2592
*
6ZTL|1|BA|C|2601
6ZTL|1|BA|A|2602
6ZTL|1|BA|G|2603

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AW

Transfer RNA; tRNA

Chain AX

Transfer RNA; tRNA

Chain BC

50S ribosomal protein L2