3D structure

PDB id
6ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in collided state bound to NusG
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CG*CAG
Length
5 nucleotides
Bulged bases
6ZTL|1|BA|A|2602
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ZTL_166 not in the Motif Atlas
Geometric match to IL_4R4V_004
Geometric discrepancy: 0.3419
The information below is about IL_4R4V_004
Detailed Annotation
Single bulged A
Broad Annotation
No text annotation
Motif group
IL_31462.7
Basepair signature
cWW-L-cWW
Number of instances in this motif group
132

Unit IDs

6ZTL|1|BA|C|2591
6ZTL|1|BA|G|2592
*
6ZTL|1|BA|C|2601
6ZTL|1|BA|A|2602
6ZTL|1|BA|G|2603

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain AW
Transfer RNA; tRNA
Chain AX
Transfer RNA; tRNA
Chain BC
50S ribosomal protein L2

Coloring options:


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