IL_6ZTL_193

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGC*GUAAA

Length

8 nucleotides

Bulged bases

6ZTL|1|BA|A|1899, 6ZTL|1|BA|A|1900

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTL_193 not in the Motif Atlas

Geometric match to IL_5ML7_010

Geometric discrepancy: 0.2569

The information below is about IL_5ML7_010

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

6ZTL|1|BA|U|1841
6ZTL|1|BA|G|1842
6ZTL|1|BA|C|1843
*
6ZTL|1|BA|G|1897
6ZTL|1|BA|U|1898
6ZTL|1|BA|A|1899
6ZTL|1|BA|A|1900
6ZTL|1|BA|A|1901

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BC

50S ribosomal protein L2