IL_6ZTM_152

3D structure

PDB id

6ZTM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state without NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

6ZTM|1|BA|U|2131, 6ZTM|1|BA|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTM_152 not in the Motif Atlas

Homologous match to IL_5J7L_330

Geometric discrepancy: 0.4847

The information below is about IL_5J7L_330

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

6ZTM|1|BA|C|2129
6ZTM|1|BA|U|2130
6ZTM|1|BA|U|2131
6ZTM|1|BA|U|2132
6ZTM|1|BA|G|2133
6ZTM|1|BA|A|2134
6ZTM|1|BA|A|2135
6ZTM|1|BA|G|2136
*
6ZTM|1|BA|U|2155
6ZTM|1|BA|G|2156
6ZTM|1|BA|G|2157
6ZTM|1|BA|A|2158
6ZTM|1|BA|G|2159

Current chains

Chain BA

23S ribosomal RNA

Nearby chains