IL_6ZTM_158
3D structure
- PDB id
- 6ZTM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in collided state without NusG
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- AUA*UGUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZTM_158 not in the Motif Atlas
- Homologous match to IL_5J7L_337
- Geometric discrepancy: 0.1023
- The information below is about IL_5J7L_337
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform with extra cWW
- Motif group
- IL_51387.3
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 21
Unit IDs
6ZTM|1|BA|A|2459
6ZTM|1|BA|U|2460
6ZTM|1|BA|A|2461
*
6ZTM|1|BA|U|2489
6ZTM|1|BA|G|2490
6ZTM|1|BA|U|2491
6ZTM|1|BA|U|2492
6ZTM|1|BA|U|2493
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain AX
- Transfer RNA; tRNA
- Chain BN
- 50S ribosomal protein L16
Coloring options: