IL_6ZTN_061
3D structure
- PDB id
- 6ZTN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAG*UGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZTN_061 not in the Motif Atlas
- Homologous match to IL_5J7L_062
- Geometric discrepancy: 0.1113
- The information below is about IL_5J7L_062
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
6ZTN|1|AA|G|1416
6ZTN|1|AA|G|1417
6ZTN|1|AA|A|1418
6ZTN|1|AA|G|1419
*
6ZTN|1|AA|U|1481
6ZTN|1|AA|G|1482
6ZTN|1|AA|A|1483
6ZTN|1|AA|C|1484
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AL
- 30S ribosomal protein S12
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: