IL_6ZTN_073

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTN_073 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2372

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6ZTN|1|BA|C|274
6ZTN|1|BA|C|275
6ZTN|1|BA|U|276
6ZTN|1|BA|G|277
6ZTN|1|BA|A|278
6ZTN|1|BA|A|279
6ZTN|1|BA|U|280
6ZTN|1|BA|C|281
*
6ZTN|1|BA|G|359
6ZTN|1|BA|U|360
6ZTN|1|BA|G|361
6ZTN|1|BA|A|362
6ZTN|1|BA|G|363

Current chains

Chain BA

23S ribosomal RNA

Nearby chains