IL_6ZTN_149
3D structure
- PDB id
- 6ZTN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AUG*CUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZTN_149 not in the Motif Atlas
- Geometric match to IL_1ZX7_004
- Geometric discrepancy: 0.2242
- The information below is about IL_1ZX7_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6ZTN|1|BA|A|2108
6ZTN|1|BA|U|2109
6ZTN|1|BA|G|2110
*
6ZTN|1|BA|C|2179
6ZTN|1|BA|U|2180
6ZTN|1|BA|U|2181
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain AZ
- Transfer RNA; tRNA
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