IL_6ZTN_162
3D structure
- PDB id
- 6ZTN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUC*GCGAG
- Length
- 8 nucleotides
- Bulged bases
- 6ZTN|1|BA|G|2576, 6ZTN|1|BA|A|2577
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZTN_162 not in the Motif Atlas
- Geometric match to IL_7RQB_097
- Geometric discrepancy: 0.1145
- The information below is about IL_7RQB_097
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_90933.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 11
Unit IDs
6ZTN|1|BA|C|2510
6ZTN|1|BA|U|2511
6ZTN|1|BA|C|2512
*
6ZTN|1|BA|G|2574
6ZTN|1|BA|C|2575
6ZTN|1|BA|G|2576
6ZTN|1|BA|A|2577
6ZTN|1|BA|G|2578
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B2
- 50S ribosomal protein L32
- Chain BD
- 50S ribosomal protein L3
Coloring options: