IL_6ZTN_207

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

6ZTN|1|BA|U|2111, 6ZTN|1|BA|G|2115, 6ZTN|1|BA|G|2116, 6ZTN|1|BA|A|2117, 6ZTN|1|BA|U|2118, 6ZTN|1|BA|A|2119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZTN|1|BA|G|2110
6ZTN|1|BA|U|2111
6ZTN|1|BA|G|2112
6ZTN|1|BA|U|2113
6ZTN|1|BA|A|2114
6ZTN|1|BA|G|2115
6ZTN|1|BA|G|2116
6ZTN|1|BA|A|2117
6ZTN|1|BA|U|2118
6ZTN|1|BA|A|2119
6ZTN|1|BA|G|2120
*
6ZTN|1|BA|C|2178
6ZTN|1|BA|C|2179

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AZ

Transfer RNA; tRNA