IL_6ZTO_108

3D structure

PDB id

6ZTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUAAG*UAUC

Length

9 nucleotides

Bulged bases

6ZTO|1|BA|A|1205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTO_108 not in the Motif Atlas

Homologous match to IL_5J7L_287

Geometric discrepancy: 0.0723

The information below is about IL_5J7L_287

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_91920.1

Basepair signature

cWW-cWW-tHH-cWW

Number of instances in this motif group

1

Unit IDs

6ZTO|1|BA|G|1202
6ZTO|1|BA|U|1203
6ZTO|1|BA|A|1204
6ZTO|1|BA|A|1205
6ZTO|1|BA|G|1206
*
6ZTO|1|BA|U|1240
6ZTO|1|BA|A|1241
6ZTO|1|BA|U|1242
6ZTO|1|BA|C|1243

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BM

50S ribosomal protein L15