IL_6ZTO_116

3D structure

PDB id

6ZTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

6ZTO|1|BA|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTO_116 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.0841

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

6ZTO|1|BA|C|1417
6ZTO|1|BA|G|1418
6ZTO|1|BA|A|1419
6ZTO|1|BA|A|1420
6ZTO|1|BA|G|1421
*
6ZTO|1|BA|C|1577
6ZTO|1|BA|U|1578
6ZTO|1|BA|A|1579
6ZTO|1|BA|A|1580
6ZTO|1|BA|G|1581

Current chains

Chain BA

23S ribosomal RNA

Nearby chains