3D structure

PDB id
6ZTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 6
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GAAC*GAGUGAAAAAGAAC
Length
18 nucleotides
Bulged bases
6ZTP|1|BA|A|504, 6ZTP|1|BA|A|508
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ZTP_076 not in the Motif Atlas
Geometric match to IL_5J7L_255
Geometric discrepancy: 0.0718
The information below is about IL_5J7L_255
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_81516.2
Basepair signature
cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
Number of instances in this motif group
6

Unit IDs

6ZTP|1|BA|G|481
6ZTP|1|BA|A|482
6ZTP|1|BA|A|483
6ZTP|1|BA|C|484
*
6ZTP|1|BA|G|496
6ZTP|1|BA|A|497
6ZTP|1|BA|G|498
6ZTP|1|BA|U|499
6ZTP|1|BA|G|500
6ZTP|1|BA|A|501
6ZTP|1|BA|A|502
6ZTP|1|BA|A|503
6ZTP|1|BA|A|504
6ZTP|1|BA|A|505
6ZTP|1|BA|G|506
6ZTP|1|BA|A|507
6ZTP|1|BA|A|508
6ZTP|1|BA|C|509

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BT
50S ribosomal protein L22
Chain BV
50S ribosomal protein L24

Coloring options:


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