IL_6ZTP_102

3D structure

PDB id

6ZTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 6

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAUG*CGC

Length

7 nucleotides

Bulged bases

6ZTP|1|BA|U|1033

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTP_102 not in the Motif Atlas

Homologous match to IL_7RQB_041

Geometric discrepancy: 0.0713

The information below is about IL_7RQB_041

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_43275.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

30

Unit IDs

6ZTP|1|BA|G|1031
6ZTP|1|BA|A|1032
6ZTP|1|BA|U|1033
6ZTP|1|BA|G|1034
*
6ZTP|1|BA|C|1121
6ZTP|1|BA|G|1122
6ZTP|1|BA|C|1123

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B6

50S ribosomal protein L36

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BN

50S ribosomal protein L16