3D structure

PDB id
6ZTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 6
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGUAAC*GGAGAAG
Length
13 nucleotides
Bulged bases
6ZTP|1|BA|G|1699
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ZTP_129 not in the Motif Atlas
Homologous match to IL_5J7L_308
Geometric discrepancy: 0.068
The information below is about IL_5J7L_308
Detailed Annotation
tSH-tSH-tHH-tHS
Broad Annotation
No text annotation
Motif group
IL_47346.2
Basepair signature
cWW-tSH-L-R-tHH-tHS-cWW
Number of instances in this motif group
7

Unit IDs

6ZTP|1|BA|C|1686
6ZTP|1|BA|G|1687
6ZTP|1|BA|U|1688
6ZTP|1|BA|A|1689
6ZTP|1|BA|A|1690
6ZTP|1|BA|C|1691
*
6ZTP|1|BA|G|1696
6ZTP|1|BA|G|1697
6ZTP|1|BA|A|1698
6ZTP|1|BA|G|1699
6ZTP|1|BA|A|1700
6ZTP|1|BA|A|1701
6ZTP|1|BA|G|1702

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain AA
Small subunit ribosomal RNA; SSU rRNA
Chain BC
50S ribosomal protein L2

Coloring options:


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