IL_6ZTP_130

3D structure

PDB id

6ZTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 6

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAUGUAG*UGAAA

Length

12 nucleotides

Bulged bases

6ZTP|1|BA|U|1714

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTP_130 not in the Motif Atlas

Homologous match to IL_5J7L_309

Geometric discrepancy: 0.095

The information below is about IL_5J7L_309

Detailed Annotation

6x5 Sarcin-Ricin; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_88269.4

Basepair signature

cWW-tWW-cSH-tWH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

6ZTP|1|BA|U|1712
6ZTP|1|BA|A|1713
6ZTP|1|BA|U|1714
6ZTP|1|BA|G|1715
6ZTP|1|BA|U|1716
6ZTP|1|BA|A|1717
6ZTP|1|BA|G|1718
*
6ZTP|1|BA|U|1742
6ZTP|1|BA|G|1743
6ZTP|1|BA|A|1744
6ZTP|1|BA|A|1745
6ZTP|1|BA|A|1746

Current chains

Chain BA

23S ribosomal RNA

Nearby chains