IL_6ZU1_074

3D structure

PDB id

6ZU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

6ZU1|1|BA|G|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU1_074 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.1931

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6ZU1|1|BA|C|274
6ZU1|1|BA|C|275
6ZU1|1|BA|U|276
6ZU1|1|BA|G|277
6ZU1|1|BA|A|278
6ZU1|1|BA|A|279
6ZU1|1|BA|U|280
6ZU1|1|BA|C|281
*
6ZU1|1|BA|G|359
6ZU1|1|BA|U|360
6ZU1|1|BA|G|361
6ZU1|1|BA|A|362
6ZU1|1|BA|G|363

Current chains

Chain BA

23S ribosomal RNA

Nearby chains