IL_6ZU1_094

3D structure

PDB id

6ZU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCAAG*CAACC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU1_094 not in the Motif Atlas

Homologous match to IL_5J7L_274

Geometric discrepancy: 0.177

The information below is about IL_5J7L_274

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

6ZU1|1|BA|G|875
6ZU1|1|BA|C|876
6ZU1|1|BA|A|877
6ZU1|1|BA|A|878
6ZU1|1|BA|G|879
*
6ZU1|1|BA|C|898
6ZU1|1|BA|A|899
6ZU1|1|BA|A|900
6ZU1|1|BA|C|901
6ZU1|1|BA|C|902

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AX

Transfer RNA; tRNA

Chain BN

50S ribosomal protein L16