3D structure

PDB id
6ZU1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGAAG*CUAAG
Length
10 nucleotides
Bulged bases
6ZU1|1|BA|A|1420
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ZU1_116 not in the Motif Atlas
Homologous match to IL_5J7L_295
Geometric discrepancy: 0.0841
The information below is about IL_5J7L_295
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_38507.2
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
16

Unit IDs

6ZU1|1|BA|C|1417
6ZU1|1|BA|G|1418
6ZU1|1|BA|A|1419
6ZU1|1|BA|A|1420
6ZU1|1|BA|G|1421
*
6ZU1|1|BA|C|1577
6ZU1|1|BA|U|1578
6ZU1|1|BA|A|1579
6ZU1|1|BA|A|1580
6ZU1|1|BA|G|1581

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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