IL_6ZUO_013

3D structure

PDB id

6ZUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

6ZUO|1|2|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZUO|1|2|G|130
6ZUO|1|2|U|140
6ZUO|1|2|A|141
6ZUO|1|2|C|142
6ZUO|1|2|U|143
6ZUO|1|2|U|144
*
6ZUO|1|2|A|175
6ZUO|1|2|U|176
6ZUO|1|2|G|177
6ZUO|1|2|C|178
6ZUO|1|2|C|179
6ZUO|1|2|G|180
6ZUO|1|2|A|181
6ZUO|1|2|C|182

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S6