IL_6ZV6_013

3D structure

PDB id

6ZV6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

6ZV6|1|2|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZV6|1|2|G|130
6ZV6|1|2|U|140
6ZV6|1|2|A|141
6ZV6|1|2|C|142
6ZV6|1|2|U|143
6ZV6|1|2|U|144
*
6ZV6|1|2|A|175
6ZV6|1|2|U|176
6ZV6|1|2|G|177
6ZV6|1|2|C|178
6ZV6|1|2|C|179
6ZV6|1|2|G|180
6ZV6|1|2|A|181
6ZV6|1|2|C|182

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S6