IL_6ZV6_019
3D structure
- PDB id
- 6ZV6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAU*AC
- Length
- 5 nucleotides
- Bulged bases
- 6ZV6|1|2|A|313
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZV6_019 not in the Motif Atlas
- Homologous match to IL_4V88_399
- Geometric discrepancy: 0.1557
- The information below is about IL_4V88_399
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
6ZV6|1|2|G|312
6ZV6|1|2|A|313
6ZV6|1|2|U|314
*
6ZV6|1|2|A|336
6ZV6|1|2|C|337
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain E
- 40S ribosomal protein S4, X isoform
- Chain G
- 40S ribosomal protein S6
Coloring options: